Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 LARS2-202ENST00000414984 2800 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 AC244517.3-201ENST00000616254 1235 ntBASIC9.59□□□□□ -0.87
PCP4P48539 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 WDR25-206ENST00000554998 1952 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 AP004782.1-201ENST00000623990 3433 ntBASIC9.59□□□□□ -0.87
PCP4P48539 CTNNA2-219ENST00000629316 3167 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC9.59□□□□□ -0.88
PCP4P48539 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
PCP4P48539 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 FMO1-201ENST00000354841 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 PPHLN1-205ENST00000395568 2170 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.58□□□□□ -0.88
PCP4P48539 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 KRT25-201ENST00000312150 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 PAX8-201ENST00000263334 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 SKP2-202ENST00000274255 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TLR9-201ENST00000360658 3870 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 FN1-206ENST00000359671 8524 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC9.58□□□□□ -0.88
PCP4P48539 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 PSMG3-AS1-203ENST00000457484 3839 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC9.58□□□□□ -0.88
PCP4P48539 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 MBLAC2-201ENST00000316610 4280 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 VIT-205ENST00000404084 2438 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC9.58□□□□□ -0.88
PCP4P48539 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 AC092135.1-201ENST00000623398 2059 ntBASIC9.58□□□□□ -0.88
PCP4P48539 AC016168.3-201ENST00000625040 3246 ntBASIC9.58□□□□□ -0.88
PCP4P48539 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9.58□□□□□ -0.88
PCP4P48539 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 AP005131.6-201ENST00000587344 4215 ntBASIC9.58□□□□□ -0.88
PCP4P48539 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TMEM255A-201ENST00000309720 3394 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
PCP4P48539 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PCP4P48539 AL023802.1-201ENST00000447372 3775 ntTSL 2 BASIC9.58□□□□□ -0.88
PCP4P48539 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 GRAP2-201ENST00000344138 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms