RNA–Protein interactions for RNA: ENST00000602133.5

ATP1A3-209, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-209ENST00000602133 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
ATP1A3-209ENST00000602133 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
ATP1A3-209ENST00000602133 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
ATP1A3-209ENST00000602133 HRCP23327 699 aa17.97■□□□□ 0.47
ATP1A3-209ENST00000602133 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
ATP1A3-209ENST00000602133 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
ATP1A3-209ENST00000602133 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
ATP1A3-209ENST00000602133 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.43
ATP1A3-209ENST00000602133 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
ATP1A3-209ENST00000602133 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
ATP1A3-209ENST00000602133 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
ATP1A3-209ENST00000602133 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
ATP1A3-209ENST00000602133 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
ATP1A3-209ENST00000602133 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
ATP1A3-209ENST00000602133 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
ATP1A3-209ENST00000602133 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
ATP1A3-209ENST00000602133 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
ATP1A3-209ENST00000602133 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
ATP1A3-209ENST00000602133 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
ATP1A3-209ENST00000602133 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
ATP1A3-209ENST00000602133 MYT1Q01538 1121 aa16.8■□□□□ 0.28
ATP1A3-209ENST00000602133 ABCC9O60706 1549 aa16.7■□□□□ 0.26
ATP1A3-209ENST00000602133 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
ATP1A3-209ENST00000602133 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
ATP1A3-209ENST00000602133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
ATP1A3-209ENST00000602133 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
ATP1A3-209ENST00000602133 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
ATP1A3-209ENST00000602133 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
ATP1A3-209ENST00000602133 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
ATP1A3-209ENST00000602133 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
ATP1A3-209ENST00000602133 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
ATP1A3-209ENST00000602133 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
ATP1A3-209ENST00000602133 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
ATP1A3-209ENST00000602133 CENPBP07199 599 aaPredicted RBP16.29■□□□□ 0.2
ATP1A3-209ENST00000602133 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.19
ATP1A3-209ENST00000602133 WIZO95785 1651 aa16.21■□□□□ 0.19
ATP1A3-209ENST00000602133 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.18
ATP1A3-209ENST00000602133 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
ATP1A3-209ENST00000602133 CEP162Q5TB80 1403 aa16.08■□□□□ 0.17
ATP1A3-209ENST00000602133 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
ATP1A3-209ENST00000602133 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
ATP1A3-209ENST00000602133 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
ATP1A3-209ENST00000602133 MIER1Q8N108 512 aa16.05■□□□□ 0.16
ATP1A3-209ENST00000602133 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
ATP1A3-209ENST00000602133 SOGA1O94964 1423 aa16.03■□□□□ 0.16
ATP1A3-209ENST00000602133 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
ATP1A3-209ENST00000602133 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
ATP1A3-209ENST00000602133 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
ATP1A3-209ENST00000602133 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
ATP1A3-209ENST00000602133 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
ATP1A3-209ENST00000602133 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
ATP1A3-209ENST00000602133 NACADO15069 1562 aa15.91■□□□□ 0.14
ATP1A3-209ENST00000602133 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
ATP1A3-209ENST00000602133 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
ATP1A3-209ENST00000602133 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
ATP1A3-209ENST00000602133 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
ATP1A3-209ENST00000602133 BCL11AQ9H165 835 aa15.75■□□□□ 0.11
ATP1A3-209ENST00000602133 EEA1Q15075 1411 aa15.73■□□□□ 0.11
ATP1A3-209ENST00000602133 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
ATP1A3-209ENST00000602133 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
ATP1A3-209ENST00000602133 CLIP1P30622 1438 aa15.68■□□□□ 0.1
ATP1A3-209ENST00000602133 APLP2Q06481 763 aa15.65■□□□□ 0.1
ATP1A3-209ENST00000602133 VPS8Q8N3P4 1428 aa15.62■□□□□ 0.09
ATP1A3-209ENST00000602133 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
ATP1A3-209ENST00000602133 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
ATP1A3-209ENST00000602133 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
ATP1A3-209ENST00000602133 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
ATP1A3-209ENST00000602133 TSHZ2Q9NRE2 1034 aa15.55■□□□□ 0.08
ATP1A3-209ENST00000602133 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
ATP1A3-209ENST00000602133 KIF21BO75037 1637 aa15.53■□□□□ 0.08
ATP1A3-209ENST00000602133 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
ATP1A3-209ENST00000602133 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
ATP1A3-209ENST00000602133 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
ATP1A3-209ENST00000602133 BCANQ96GW7 911 aa15.47■□□□□ 0.07
ATP1A3-209ENST00000602133 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
ATP1A3-209ENST00000602133 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
ATP1A3-209ENST00000602133 ITGAEP38570 1179 aa15.44■□□□□ 0.06
ATP1A3-209ENST00000602133 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
ATP1A3-209ENST00000602133 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
ATP1A3-209ENST00000602133 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
ATP1A3-209ENST00000602133 FKBP8Q14318 412 aa15.34■□□□□ 0.05
ATP1A3-209ENST00000602133 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
ATP1A3-209ENST00000602133 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
ATP1A3-209ENST00000602133 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
ATP1A3-209ENST00000602133 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
ATP1A3-209ENST00000602133 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.04
ATP1A3-209ENST00000602133 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
ATP1A3-209ENST00000602133 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
ATP1A3-209ENST00000602133 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
ATP1A3-209ENST00000602133 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
ATP1A3-209ENST00000602133 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
ATP1A3-209ENST00000602133 TOP2BQ02880 1626 aa15.23■□□□□ 0.03
ATP1A3-209ENST00000602133 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
ATP1A3-209ENST00000602133 CUX2O14529 1486 aa15.22■□□□□ 0.03
ATP1A3-209ENST00000602133 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
ATP1A3-209ENST00000602133 RBM19Q9Y4C8 960 aaKnown RBP15.21■□□□□ 0.03
ATP1A3-209ENST00000602133 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
ATP1A3-209ENST00000602133 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
ATP1A3-209ENST00000602133 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
ATP1A3-209ENST00000602133 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms