RNA–Protein interactions for RNA: ENST00000263334.9

PAX8-201, Transcript of paired box 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAX8, Length 4,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-201ENST00000263334 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
PAX8-201ENST00000263334 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
PAX8-201ENST00000263334 SHROOM4Q9ULL8 1493 aa19.77■□□□□ 0.75
PAX8-201ENST00000263334 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
PAX8-201ENST00000263334 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
PAX8-201ENST00000263334 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
PAX8-201ENST00000263334 PCGF6Q9BYE7 350 aa18.43■□□□□ 0.54
PAX8-201ENST00000263334 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PAX8-201ENST00000263334 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
PAX8-201ENST00000263334 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
PAX8-201ENST00000263334 TTBK1Q5TCY1 1321 aaPredicted RBP18.07■□□□□ 0.48
PAX8-201ENST00000263334 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
PAX8-201ENST00000263334 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
PAX8-201ENST00000263334 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
PAX8-201ENST00000263334 ABCC9O60706 1549 aa17.8■□□□□ 0.44
PAX8-201ENST00000263334 HRCP23327 699 aa17.77■□□□□ 0.44
PAX8-201ENST00000263334 APLP2Q06481 763 aa17.71■□□□□ 0.43
PAX8-201ENST00000263334 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
PAX8-201ENST00000263334 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
PAX8-201ENST00000263334 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
PAX8-201ENST00000263334 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
PAX8-201ENST00000263334 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
PAX8-201ENST00000263334 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
PAX8-201ENST00000263334 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
PAX8-201ENST00000263334 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
PAX8-201ENST00000263334 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
PAX8-201ENST00000263334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
PAX8-201ENST00000263334 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
PAX8-201ENST00000263334 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
PAX8-201ENST00000263334 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
PAX8-201ENST00000263334 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
PAX8-201ENST00000263334 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
PAX8-201ENST00000263334 ITGAEP38570 1179 aa17.1■□□□□ 0.33
PAX8-201ENST00000263334 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
PAX8-201ENST00000263334 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
PAX8-201ENST00000263334 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
PAX8-201ENST00000263334 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
PAX8-201ENST00000263334 NACADO15069 1562 aa16.79■□□□□ 0.28
PAX8-201ENST00000263334 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
PAX8-201ENST00000263334 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
PAX8-201ENST00000263334 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
PAX8-201ENST00000263334 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
PAX8-201ENST00000263334 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
PAX8-201ENST00000263334 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
PAX8-201ENST00000263334 MYT1Q01538 1121 aa16.57■□□□□ 0.24
PAX8-201ENST00000263334 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
PAX8-201ENST00000263334 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
PAX8-201ENST00000263334 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
PAX8-201ENST00000263334 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
PAX8-201ENST00000263334 SOGA1O94964 1423 aa16.51■□□□□ 0.23
PAX8-201ENST00000263334 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
PAX8-201ENST00000263334 WIZO95785 1651 aa16.48■□□□□ 0.23
PAX8-201ENST00000263334 CLIP1P30622 1438 aa16.48■□□□□ 0.23
PAX8-201ENST00000263334 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
PAX8-201ENST00000263334 NEFLP07196 543 aa16.46■□□□□ 0.23
PAX8-201ENST00000263334 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
PAX8-201ENST00000263334 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
PAX8-201ENST00000263334 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
PAX8-201ENST00000263334 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
PAX8-201ENST00000263334 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
PAX8-201ENST00000263334 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
PAX8-201ENST00000263334 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
PAX8-201ENST00000263334 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
PAX8-201ENST00000263334 EEA1Q15075 1411 aa16.4■□□□□ 0.22
PAX8-201ENST00000263334 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
PAX8-201ENST00000263334 FBLN2P98095 1184 aa16.32■□□□□ 0.2
PAX8-201ENST00000263334 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
PAX8-201ENST00000263334 MIER1Q8N108 512 aa16.26■□□□□ 0.19
PAX8-201ENST00000263334 BCANQ96GW7 911 aa16.23■□□□□ 0.19
PAX8-201ENST00000263334 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
PAX8-201ENST00000263334 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
PAX8-201ENST00000263334 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
PAX8-201ENST00000263334 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
PAX8-201ENST00000263334 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
PAX8-201ENST00000263334 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
PAX8-201ENST00000263334 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
PAX8-201ENST00000263334 ANP32CO43423 234 aa16.16■□□□□ 0.18
PAX8-201ENST00000263334 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
PAX8-201ENST00000263334 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
PAX8-201ENST00000263334 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
PAX8-201ENST00000263334 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
PAX8-201ENST00000263334 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
PAX8-201ENST00000263334 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
PAX8-201ENST00000263334 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
PAX8-201ENST00000263334 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
PAX8-201ENST00000263334 TONSLQ96HA7 1378 aa16.05■□□□□ 0.16
PAX8-201ENST00000263334 CUX2O14529 1486 aa16.03■□□□□ 0.16
PAX8-201ENST00000263334 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
PAX8-201ENST00000263334 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
PAX8-201ENST00000263334 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
PAX8-201ENST00000263334 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
PAX8-201ENST00000263334 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
PAX8-201ENST00000263334 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
PAX8-201ENST00000263334 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
PAX8-201ENST00000263334 FKBP8Q14318 412 aa15.91■□□□□ 0.14
PAX8-201ENST00000263334 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
PAX8-201ENST00000263334 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
PAX8-201ENST00000263334 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.13
PAX8-201ENST00000263334 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
PAX8-201ENST00000263334 FAM9BQ8IZU0 186 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms