RNA–Protein interactions for RNA: ENST00000360658.2

TLR9-201, Transcript of toll like receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TLR9, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9-201ENST00000360658 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
TLR9-201ENST00000360658 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.65
TLR9-201ENST00000360658 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
TLR9-201ENST00000360658 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
TLR9-201ENST00000360658 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
TLR9-201ENST00000360658 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
TLR9-201ENST00000360658 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
TLR9-201ENST00000360658 FAM9AQ8IZU1 332 aaPredicted RBP17.58■□□□□ 0.41
TLR9-201ENST00000360658 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
TLR9-201ENST00000360658 HRCP23327 699 aa17.44■□□□□ 0.38
TLR9-201ENST00000360658 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
TLR9-201ENST00000360658 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
TLR9-201ENST00000360658 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
TLR9-201ENST00000360658 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
TLR9-201ENST00000360658 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
TLR9-201ENST00000360658 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
TLR9-201ENST00000360658 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
TLR9-201ENST00000360658 ABCC9O60706 1549 aa16.99■□□□□ 0.31
TLR9-201ENST00000360658 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
TLR9-201ENST00000360658 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
TLR9-201ENST00000360658 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
TLR9-201ENST00000360658 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
TLR9-201ENST00000360658 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
TLR9-201ENST00000360658 MYT1Q01538 1121 aa16.73■□□□□ 0.27
TLR9-201ENST00000360658 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
TLR9-201ENST00000360658 APLP2Q06481 763 aa16.69■□□□□ 0.26
TLR9-201ENST00000360658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
TLR9-201ENST00000360658 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
TLR9-201ENST00000360658 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
TLR9-201ENST00000360658 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
TLR9-201ENST00000360658 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
TLR9-201ENST00000360658 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
TLR9-201ENST00000360658 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.21
TLR9-201ENST00000360658 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
TLR9-201ENST00000360658 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
TLR9-201ENST00000360658 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
TLR9-201ENST00000360658 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
TLR9-201ENST00000360658 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
TLR9-201ENST00000360658 ITGAEP38570 1179 aa16.23■□□□□ 0.19
TLR9-201ENST00000360658 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
TLR9-201ENST00000360658 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
TLR9-201ENST00000360658 NACADO15069 1562 aa16.11■□□□□ 0.17
TLR9-201ENST00000360658 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
TLR9-201ENST00000360658 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
TLR9-201ENST00000360658 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
TLR9-201ENST00000360658 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
TLR9-201ENST00000360658 WIZO95785 1651 aa15.95■□□□□ 0.14
TLR9-201ENST00000360658 CEP162Q5TB80 1403 aa15.93■□□□□ 0.14
TLR9-201ENST00000360658 SOGA1O94964 1423 aa15.92■□□□□ 0.14
TLR9-201ENST00000360658 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
TLR9-201ENST00000360658 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
TLR9-201ENST00000360658 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
TLR9-201ENST00000360658 P3H3Q8IVL6 736 aa15.82■□□□□ 0.12
TLR9-201ENST00000360658 MIER1Q8N108 512 aa15.81■□□□□ 0.12
TLR9-201ENST00000360658 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
TLR9-201ENST00000360658 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
TLR9-201ENST00000360658 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
TLR9-201ENST00000360658 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
TLR9-201ENST00000360658 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
TLR9-201ENST00000360658 CLIP1P30622 1438 aa15.72■□□□□ 0.11
TLR9-201ENST00000360658 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
TLR9-201ENST00000360658 EEA1Q15075 1411 aa15.63■□□□□ 0.09
TLR9-201ENST00000360658 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
TLR9-201ENST00000360658 NEFLP07196 543 aa15.6■□□□□ 0.09
TLR9-201ENST00000360658 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
TLR9-201ENST00000360658 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
TLR9-201ENST00000360658 BCANQ96GW7 911 aa15.56■□□□□ 0.08
TLR9-201ENST00000360658 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
TLR9-201ENST00000360658 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
TLR9-201ENST00000360658 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
TLR9-201ENST00000360658 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
TLR9-201ENST00000360658 SMARCA4P51532 1647 aa15.52■□□□□ 0.07
TLR9-201ENST00000360658 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
TLR9-201ENST00000360658 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
TLR9-201ENST00000360658 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
TLR9-201ENST00000360658 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
TLR9-201ENST00000360658 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
TLR9-201ENST00000360658 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
TLR9-201ENST00000360658 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
TLR9-201ENST00000360658 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
TLR9-201ENST00000360658 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
TLR9-201ENST00000360658 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
TLR9-201ENST00000360658 ANP32CO43423 234 aa15.37■□□□□ 0.05
TLR9-201ENST00000360658 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
TLR9-201ENST00000360658 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
TLR9-201ENST00000360658 CHIC2Q9UKJ5 165 aa15.34■□□□□ 0.05
TLR9-201ENST00000360658 SIN3AQ96ST3 1273 aa15.33■□□□□ 0.05
TLR9-201ENST00000360658 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
TLR9-201ENST00000360658 FBLN2P98095 1184 aa15.31■□□□□ 0.04
TLR9-201ENST00000360658 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
TLR9-201ENST00000360658 FKBP8Q14318 412 aa15.3■□□□□ 0.04
TLR9-201ENST00000360658 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
TLR9-201ENST00000360658 KCNH8Q96L42 1107 aa15.27■□□□□ 0.03
TLR9-201ENST00000360658 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
TLR9-201ENST00000360658 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
TLR9-201ENST00000360658 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
TLR9-201ENST00000360658 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
TLR9-201ENST00000360658 CUX2O14529 1486 aa15.24■□□□□ 0.03
TLR9-201ENST00000360658 MTUS2Q5JR59 1369 aa15.22■□□□□ 0.03
TLR9-201ENST00000360658 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms