Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2CP42773 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.96□□□□□ -0.18
CDKN2CP42773 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2CP42773 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDKN2CP42773 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CDKN2CP42773 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CDKN2CP42773 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.96□□□□□ -0.18
CDKN2CP42773 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2CP42773 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.96□□□□□ -0.18
CDKN2CP42773 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2CP42773 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2CP42773 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CDKN2CP42773 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDKN2CP42773 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2CP42773 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 AC139712.1-201ENST00000378256 1875 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 AC023794.5-201ENST00000564380 2157 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKN2CP42773 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKN2CP42773 POM121L8P-201ENST00000417732 1281 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 POM121L9P-203ENST00000441984 1285 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 AC092183.1-201ENST00000469884 875 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 TMEM198B-204ENST00000484016 896 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKN2CP42773 AC004233.3-201ENST00000607794 1269 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 KHSRPP1-201ENST00000427983 1768 ntBASIC13.95□□□□□ -0.18
CDKN2CP42773 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDKN2CP42773 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDKN2CP42773 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2CP42773 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2CP42773 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2CP42773 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN2CP42773 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN2CP42773 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN2CP42773 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 AC087499.6-201ENST00000411576 835 ntBASIC13.94□□□□□ -0.18
CDKN2CP42773 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.94□□□□□ -0.18
CDKN2CP42773 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKN2CP42773 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN2CP42773 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN2CP42773 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms