Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 AC006504.5-208ENST00000588784 2401 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 AC215219.1-201ENST00000400706 1817 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 MIR658-201ENST00000385210 100 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
APOBEC1P41238 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBEC1P41238 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBEC1P41238 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.32□□□□□ -0.28
APOBEC1P41238 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.32□□□□□ -0.28
APOBEC1P41238 HIST2H2BB-201ENST00000449108 381 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.32□□□□□ -0.28
APOBEC1P41238 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.32□□□□□ -0.28
APOBEC1P41238 AC090505.1-201ENST00000430515 1834 ntBASIC13.32□□□□□ -0.28
APOBEC1P41238 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOBEC1P41238 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 AL023775.1-201ENST00000454907 1746 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 MIR326-201ENST00000362220 95 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 ATP5G2P4-201ENST00000442175 420 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
APOBEC1P41238 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 RNA5SP412-201ENST00000516234 123 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 SORD2P-201ENST00000558556 1069 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.31□□□□□ -0.28
APOBEC1P41238 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.31□□□□□ -0.28
APOBEC1P41238 DUX4L46-201ENST00000566845 751 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms