Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
MDH1P40925 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 AL031284.1-201ENST00000419297 478 ntBASIC14.81□□□□□ -0.04
MDH1P40925 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.81□□□□□ -0.04
MDH1P40925 SPDYE11-202ENST00000450699 704 ntBASIC14.81□□□□□ -0.04
MDH1P40925 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
MDH1P40925 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.81□□□□□ -0.04
MDH1P40925 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.81□□□□□ -0.04
MDH1P40925 SPDYE9P-201ENST00000570642 692 ntBASIC14.81□□□□□ -0.04
MDH1P40925 AC000095.1-201ENST00000603208 874 ntBASIC14.81□□□□□ -0.04
MDH1P40925 LINC01115-203ENST00000606068 577 ntBASIC14.81□□□□□ -0.04
MDH1P40925 Z83851.2-201ENST00000609564 659 ntBASIC14.81□□□□□ -0.04
MDH1P40925 SPDYE10P-202ENST00000612005 668 ntBASIC14.81□□□□□ -0.04
MDH1P40925 SPDYE8P-202ENST00000612377 668 ntBASIC14.81□□□□□ -0.04
MDH1P40925 MIR6069-201ENST00000620069 79 ntBASIC14.81□□□□□ -0.04
MDH1P40925 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
MDH1P40925 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MDH1P40925 UXT-AS1-201ENST00000590504 1525 ntBASIC14.81□□□□□ -0.04
MDH1P40925 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MDH1P40925 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MDH1P40925 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MDH1P40925 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.8□□□□□ -0.04
MDH1P40925 KRT8P48-201ENST00000515599 1220 ntBASIC14.8□□□□□ -0.04
MDH1P40925 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.8□□□□□ -0.04
MDH1P40925 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.8□□□□□ -0.04
MDH1P40925 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 LINC00628-201ENST00000628516 1289 ntBASIC14.8□□□□□ -0.04
MDH1P40925 AC093525.8-201ENST00000624099 1342 ntBASIC14.8□□□□□ -0.04
MDH1P40925 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MDH1P40925 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 AL158070.2-201ENST00000623713 1621 ntBASIC14.8□□□□□ -0.04
MDH1P40925 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.8□□□□□ -0.04
MDH1P40925 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MDH1P40925 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
MDH1P40925 AC107375.1-201ENST00000564464 2231 ntBASIC14.8□□□□□ -0.04
MDH1P40925 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.79□□□□□ -0.04
MDH1P40925 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MDH1P40925 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MDH1P40925 PEG13-201ENST00000631594 5667 ntBASIC14.79□□□□□ -0.04
MDH1P40925 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MDH1P40925 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MDH1P40925 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MDH1P40925 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MDH1P40925 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms