Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.77■□□□□ 0.28
COPB2P35606 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.77■□□□□ 0.28
COPB2P35606 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 RN7SL181P-201ENST00000462921 277 ntBASIC16.77■□□□□ 0.28
COPB2P35606 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 AC003686.1-201ENST00000550956 1034 ntBASIC16.77■□□□□ 0.28
COPB2P35606 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
COPB2P35606 MIR3147-201ENST00000577811 66 ntBASIC16.77■□□□□ 0.28
COPB2P35606 MIR3677-201ENST00000578964 60 ntBASIC16.77■□□□□ 0.28
COPB2P35606 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 AC073352.2-201ENST00000609385 439 ntBASIC16.77■□□□□ 0.28
COPB2P35606 MEG3_2.1-201ENST00000611456 105 ntBASIC16.77■□□□□ 0.28
COPB2P35606 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.77■□□□□ 0.28
COPB2P35606 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPB2P35606 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
COPB2P35606 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.77■□□□□ 0.27
COPB2P35606 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
COPB2P35606 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COPB2P35606 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.77■□□□□ 0.27
COPB2P35606 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.77■□□□□ 0.27
COPB2P35606 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.77■□□□□ 0.27
COPB2P35606 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPB2P35606 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.77■□□□□ 0.27
COPB2P35606 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 KRT18P9-201ENST00000604826 1300 ntBASIC16.76■□□□□ 0.27
COPB2P35606 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 OR2K2-202ENST00000374428 1038 ntBASIC16.76■□□□□ 0.27
COPB2P35606 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 RPL17P11-201ENST00000417593 544 ntBASIC16.76■□□□□ 0.27
COPB2P35606 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.76■□□□□ 0.27
COPB2P35606 AC130709.1-201ENST00000484779 1212 ntBASIC16.76■□□□□ 0.27
COPB2P35606 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
COPB2P35606 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 AC092299.1-201ENST00000632679 757 ntBASIC16.76■□□□□ 0.27
COPB2P35606 AL805961.1-201ENST00000642026 753 ntBASIC16.76■□□□□ 0.27
COPB2P35606 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 CICP24-201ENST00000605464 2705 ntBASIC16.76■□□□□ 0.27
COPB2P35606 LINC01165-201ENST00000445190 1623 ntBASIC16.76■□□□□ 0.27
COPB2P35606 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.76■□□□□ 0.27
COPB2P35606 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.76■□□□□ 0.27
COPB2P35606 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
COPB2P35606 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPB2P35606 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COPB2P35606 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COPB2P35606 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COPB2P35606 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COPB2P35606 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COPB2P35606 AC106881.1-201ENST00000605849 3329 ntBASIC16.75■□□□□ 0.27
COPB2P35606 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COPB2P35606 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COPB2P35606 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COPB2P35606 AC074138.1-201ENST00000611182 1303 ntBASIC16.75■□□□□ 0.27
COPB2P35606 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms