Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 OR10B1P-201ENST00000601666 907 ntBASIC12.65□□□□□ -0.38
CCL1P22362 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL1P22362 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
CCL1P22362 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL1P22362 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCL1P22362 AC098614.1-201ENST00000368528 745 ntBASIC12.64□□□□□ -0.39
CCL1P22362 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 FAM8A4P-201ENST00000435433 1213 ntBASIC12.64□□□□□ -0.39
CCL1P22362 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL1P22362 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCL1P22362 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCL1P22362 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL1P22362 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL1P22362 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL1P22362 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
CCL1P22362 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL1P22362 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 AL022313.4-201ENST00000562756 2046 ntBASIC12.63□□□□□ -0.39
CCL1P22362 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 USP17L6P-201ENST00000382470 1197 ntBASIC12.63□□□□□ -0.39
CCL1P22362 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms