Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BOLA2P3-201ENST00000404566 256 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 AL139094.1-201ENST00000405549 1188 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CAPN3P20807 TTTY23B-201ENST00000442790 549 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.24□□□□□ -0.13
CAPN3P20807 SRD5A3P1-201ENST00000603021 949 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.24□□□□□ -0.13
CAPN3P20807 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 AC011840.2-201ENST00000563063 1520 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CAPN3P20807 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CAPN3P20807 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CAPN3P20807 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 PPT1-213ENST00000641319 2388 ntBASIC14.23□□□□□ -0.13
CAPN3P20807 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 AC067750.1-201ENST00000608826 6545 ntBASIC14.23□□□□□ -0.13
CAPN3P20807 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
CAPN3P20807 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPN3P20807 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPN3P20807 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 AC036164.1-201ENST00000570544 333 ntBASIC14.23□□□□□ -0.13
CAPN3P20807 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPN3P20807 COX11-210ENST00000639671 696 ntBASIC14.23□□□□□ -0.13
CAPN3P20807 AL033527.4-201ENST00000641026 673 ntBASIC14.23□□□□□ -0.13
CAPN3P20807 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPN3P20807 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPN3P20807 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CAPN3P20807 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CAPN3P20807 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPN3P20807 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPN3P20807 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms