Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ATP5G2P4-201ENST00000442175 420 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 HOMER2P2-201ENST00000451621 847 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AC017083.2-201ENST00000608069 979 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AL358472.3-201ENST00000608147 415 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 AC026748.1-201ENST00000624349 3251 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 KRT8P4-201ENST00000509735 1454 ntBASIC14.88□□□□□ -0.03
HLA-DPA1P20036 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPA1P20036 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms