Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
DEFA4P12838 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
DEFA4P12838 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
DEFA4P12838 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
DEFA4P12838 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 MST1P2-201ENST00000457982 2291 ntBASIC12.08□□□□□ -0.48
DEFA4P12838 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 CSPG4P11-201ENST00000560634 4910 ntBASIC12.08□□□□□ -0.48
DEFA4P12838 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.08□□□□□ -0.48
DEFA4P12838 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
DEFA4P12838 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
DEFA4P12838 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.08□□□□□ -0.48
DEFA4P12838 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 SPDYE19P-201ENST00000338590 713 ntBASIC12.08□□□□□ -0.48
DEFA4P12838 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.08□□□□□ -0.48
DEFA4P12838 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.08□□□□□ -0.48
DEFA4P12838 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.08□□□□□ -0.48
DEFA4P12838 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.08□□□□□ -0.48
DEFA4P12838 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.08□□□□□ -0.48
DEFA4P12838 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 DGCR9-201ENST00000609630 2415 ntBASIC12.08□□□□□ -0.48
DEFA4P12838 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.08□□□□□ -0.48
DEFA4P12838 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 CLK3P2-201ENST00000427566 1453 ntBASIC12.08□□□□□ -0.48
DEFA4P12838 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
DEFA4P12838 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.08□□□□□ -0.48
DEFA4P12838 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.07□□□□□ -0.48
DEFA4P12838 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
DEFA4P12838 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
DEFA4P12838 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 PMS2P2-201ENST00000425039 1128 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.07□□□□□ -0.48
DEFA4P12838 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
DEFA4P12838 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 SPDYE18-201ENST00000510091 1050 ntBASIC12.07□□□□□ -0.48
DEFA4P12838 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.07□□□□□ -0.48
DEFA4P12838 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
DEFA4P12838 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.07□□□□□ -0.48
DEFA4P12838 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.07□□□□□ -0.48
DEFA4P12838 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.07□□□□□ -0.48
DEFA4P12838 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms