Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AP000845.1-201ENST00000581677 2131 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 KRT18P36-201ENST00000411618 1276 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNB1P11230 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AC018463.1-201ENST00000456674 917 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNB1P11230 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AC087392.5-201ENST00000612517 489 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 KRT8P31-201ENST00000504812 1408 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 AC015656.1-201ENST00000624209 3578 ntBASIC14.9□□□□□ -0.02
CHRNB1P11230 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB1P11230 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB1P11230 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB1P11230 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 AC007292.2-201ENST00000593524 1812 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNB1P11230 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 TMBIM7P-202ENST00000641474 1516 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 Z69890.1-201ENST00000382990 339 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 AC007326.1-201ENST00000604539 458 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 AL132780.4-201ENST00000624870 1135 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB1P11230 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms