Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOA4P06727 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.82□□□□□ -0.04
APOA4P06727 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.82□□□□□ -0.04
APOA4P06727 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.82□□□□□ -0.04
APOA4P06727 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.82□□□□□ -0.04
APOA4P06727 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
APOA4P06727 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOA4P06727 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA4P06727 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA4P06727 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 TLE1P1-201ENST00000422965 589 ntBASIC14.81□□□□□ -0.04
APOA4P06727 C2orf27AP3-201ENST00000434123 579 ntBASIC14.81□□□□□ -0.04
APOA4P06727 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.81□□□□□ -0.04
APOA4P06727 USP32P1-208ENST00000506594 1164 ntBASIC14.81□□□□□ -0.04
APOA4P06727 AC106760.1-201ENST00000508690 800 ntBASIC14.81□□□□□ -0.04
APOA4P06727 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.81□□□□□ -0.04
APOA4P06727 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.81□□□□□ -0.04
APOA4P06727 BTNL10-201ENST00000595971 695 ntBASIC14.81□□□□□ -0.04
APOA4P06727 AL354718.3-201ENST00000616414 581 ntBASIC14.81□□□□□ -0.04
APOA4P06727 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 CR382287.1-201ENST00000623954 586 ntBASIC14.81□□□□□ -0.04
APOA4P06727 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA4P06727 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA4P06727 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA4P06727 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
APOA4P06727 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
APOA4P06727 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
APOA4P06727 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA4P06727 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 KRT43P-201ENST00000434019 910 ntBASIC14.8□□□□□ -0.04
APOA4P06727 AC245100.3-201ENST00000441281 285 ntBASIC14.8□□□□□ -0.04
APOA4P06727 BCRP2-202ENST00000447763 634 ntBASIC14.8□□□□□ -0.04
APOA4P06727 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.8□□□□□ -0.04
APOA4P06727 BCRP6-201ENST00000510112 632 ntBASIC14.8□□□□□ -0.04
APOA4P06727 BCRP7-201ENST00000511549 544 ntBASIC14.8□□□□□ -0.04
APOA4P06727 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.8□□□□□ -0.04
APOA4P06727 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 RN7SL48P-201ENST00000579283 293 ntBASIC14.8□□□□□ -0.04
APOA4P06727 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
APOA4P06727 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 MIR6074-201ENST00000612054 107 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms