Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
APOBP04114 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
APOBP04114 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC8.82□□□□□ -1
APOBP04114 DKKL1P1-201ENST00000400550 698 ntBASIC8.82□□□□□ -1
APOBP04114 YY1P2-201ENST00000438766 948 ntBASIC8.82□□□□□ -1
APOBP04114 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
APOBP04114 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC8.82□□□□□ -1
APOBP04114 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
APOBP04114 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC8.82□□□□□ -1
APOBP04114 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 USP39-220ENST00000613444 2161 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 PPT1-215ENST00000641471 2368 ntBASIC8.82□□□□□ -1
APOBP04114 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC8.81□□□□□ -1
APOBP04114 GALP-202ENST00000440823 889 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 AC132812.1-201ENST00000583145 892 ntBASIC8.81□□□□□ -1
APOBP04114 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 AL359091.4-201ENST00000610052 409 ntBASIC8.81□□□□□ -1
APOBP04114 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
APOBP04114 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
APOBP04114 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 AC092115.1-201ENST00000566277 1402 ntBASIC8.81□□□□□ -1
APOBP04114 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
APOBP04114 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 RPL10-203ENST00000406022 748 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 CDC37P2-201ENST00000562287 1029 ntBASIC8.81□□□□□ -1
APOBP04114 CCND3P2-201ENST00000579393 537 ntBASIC8.81□□□□□ -1
APOBP04114 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC8.81□□□□□ -1
APOBP04114 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 LCK-206ENST00000373564 2137 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 RPL18AP16-201ENST00000424057 531 ntBASIC8.81□□□□□ -1
APOBP04114 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
APOBP04114 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC8.81□□□□□ -1
APOBP04114 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 AC005777.1-201ENST00000588332 187 ntBASIC8.81□□□□□ -1
APOBP04114 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC8.81□□□□□ -1
APOBP04114 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC8.81□□□□□ -1
APOBP04114 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC8.81□□□□□ -1
APOBP04114 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
APOBP04114 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
APOBP04114 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC8.81□□□□□ -1
APOBP04114 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms