Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC100757.3-201ENST00000622361 1406 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC020658.7-201ENST00000624274 2442 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
MT-ND1P03886 AC083964.2-201ENST00000623988 2396 ntBASIC13.97□□□□□ -0.17
MT-ND1P03886 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ND1P03886 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.97□□□□□ -0.17
MT-ND1P03886 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.97□□□□□ -0.17
MT-ND1P03886 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
MT-ND1P03886 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ND1P03886 AC092337.1-201ENST00000568699 1129 ntBASIC13.97□□□□□ -0.17
MT-ND1P03886 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.97□□□□□ -0.17
MT-ND1P03886 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 AL590560.3-201ENST00000623350 461 ntBASIC13.97□□□□□ -0.17
MT-ND1P03886 AC004461.2-201ENST00000629517 803 ntBASIC13.97□□□□□ -0.17
MT-ND1P03886 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 AGAP10P-201ENST00000454844 2418 ntBASIC13.97□□□□□ -0.17
MT-ND1P03886 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MT-ND1P03886 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
MT-ND1P03886 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MT-ND1P03886 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MT-ND1P03886 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
MT-ND1P03886 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 HSPA8P5-201ENST00000456928 2069 ntBASIC13.96□□□□□ -0.17
MT-ND1P03886 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 TREML5P-201ENST00000421694 576 ntBASIC13.96□□□□□ -0.17
MT-ND1P03886 AC114501.2-201ENST00000439631 535 ntBASIC13.96□□□□□ -0.17
MT-ND1P03886 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ND1P03886 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ND1P03886 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.96□□□□□ -0.17
MT-ND1P03886 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 AP001160.2-201ENST00000596071 487 ntBASIC13.96□□□□□ -0.17
MT-ND1P03886 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 AC093028.1-201ENST00000622998 982 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms