Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 GGTLC5P-201ENST00000617623 998 ntBASIC11.79□□□□□ -0.52
APOC3P02656 AC073592.4-201ENST00000623827 446 ntBASIC11.79□□□□□ -0.52
APOC3P02656 GAMT-205ENST00000640762 751 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.79□□□□□ -0.52
APOC3P02656 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 AL359510.2-201ENST00000624958 2249 ntBASIC11.79□□□□□ -0.52
APOC3P02656 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 AL354861.3-201ENST00000600140 2412 ntBASIC11.78□□□□□ -0.52
APOC3P02656 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 GBP1P1-201ENST00000394662 1740 ntBASIC11.78□□□□□ -0.52
APOC3P02656 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 CAPN10-AS1-201ENST00000567819 4000 ntBASIC11.78□□□□□ -0.52
APOC3P02656 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC3P02656 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC3P02656 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 RBM17P1-201ENST00000453646 1190 ntBASIC11.78□□□□□ -0.52
APOC3P02656 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC3P02656 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.78□□□□□ -0.52
APOC3P02656 AC064862.7-201ENST00000604520 867 ntBASIC11.78□□□□□ -0.52
APOC3P02656 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 AC073648.6-201ENST00000641589 218 ntBASIC11.78□□□□□ -0.52
APOC3P02656 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 AC215219.1-201ENST00000400706 1817 ntBASIC11.78□□□□□ -0.52
APOC3P02656 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.78□□□□□ -0.52
APOC3P02656 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 AC022364.1-202ENST00000617468 2409 ntBASIC11.78□□□□□ -0.52
APOC3P02656 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
APOC3P02656 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
APOC3P02656 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC3P02656 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC3P02656 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.77□□□□□ -0.52
APOC3P02656 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.77□□□□□ -0.52
APOC3P02656 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC3P02656 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms