Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC023141.7-201ENST00000430646 407 ntBASIC20.81■□□□□ 0.92
POLR1AO95602 IGHEP2-201ENST00000519308 1256 ntBASIC20.81■□□□□ 0.92
POLR1AO95602 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 AC092862.1-201ENST00000541534 533 ntBASIC20.81■□□□□ 0.92
POLR1AO95602 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.81■□□□□ 0.92
POLR1AO95602 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.81■□□□□ 0.92
POLR1AO95602 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR1AO95602 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
POLR1AO95602 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
POLR1AO95602 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
POLR1AO95602 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.8■□□□□ 0.92
POLR1AO95602 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.8■□□□□ 0.92
POLR1AO95602 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
POLR1AO95602 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.8■□□□□ 0.92
POLR1AO95602 RN7SL564P-201ENST00000496309 250 ntBASIC20.8■□□□□ 0.92
POLR1AO95602 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR1AO95602 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.8■□□□□ 0.92
POLR1AO95602 CR392039.1-201ENST00000623217 204 ntBASIC20.8■□□□□ 0.92
POLR1AO95602 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
POLR1AO95602 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
POLR1AO95602 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR1AO95602 SALL4P5-201ENST00000419001 1760 ntBASIC20.8■□□□□ 0.92
POLR1AO95602 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR1AO95602 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
POLR1AO95602 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR1AO95602 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR1AO95602 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR1AO95602 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
POLR1AO95602 OR8T1P-201ENST00000421347 918 ntBASIC20.79■□□□□ 0.92
POLR1AO95602 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 IGHVIII-5-2-201ENST00000522505 261 ntBASIC20.79■□□□□ 0.92
POLR1AO95602 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC20.79■□□□□ 0.92
POLR1AO95602 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
POLR1AO95602 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR1AO95602 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
POLR1AO95602 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 OR51A9P-201ENST00000422578 911 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 AC092135.3-201ENST00000624151 1846 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 AL512599.1-201ENST00000430724 685 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 AC092580.1-201ENST00000433998 658 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 RPS23-207ENST00000511844 530 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR1AO95602 AC018846.1-201ENST00000568231 183 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 NAV1-210ENST00000593583 726 ntBASIC20.78■□□□□ 0.92
POLR1AO95602 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
POLR1AO95602 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR1AO95602 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR1AO95602 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
POLR1AO95602 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
POLR1AO95602 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
POLR1AO95602 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1AO95602 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms