Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.87□□□□□ -0.35
XRCC2O43543 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.87□□□□□ -0.35
XRCC2O43543 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.87□□□□□ -0.35
XRCC2O43543 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.87□□□□□ -0.35
XRCC2O43543 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 FKBP4P6-201ENST00000457486 1332 ntBASIC12.87□□□□□ -0.35
XRCC2O43543 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
XRCC2O43543 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 AC097359.2-201ENST00000604992 2389 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 AC107918.4-201ENST00000641966 3141 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 RN7SKP230-201ENST00000365642 335 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.86□□□□□ -0.35
XRCC2O43543 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
XRCC2O43543 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
XRCC2O43543 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.86□□□□□ -0.35
XRCC2O43543 RN7SL692P-201ENST00000464677 288 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.86□□□□□ -0.35
XRCC2O43543 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 AC106760.1-201ENST00000508690 800 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 ALG3P1-201ENST00000508806 1114 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.86□□□□□ -0.35
XRCC2O43543 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 AL022328.1-201ENST00000610050 478 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 AC011840.2-201ENST00000563063 1520 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
XRCC2O43543 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.86□□□□□ -0.35
XRCC2O43543 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
XRCC2O43543 AC092053.3-201ENST00000641308 4975 ntBASIC12.86□□□□□ -0.35
XRCC2O43543 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms