Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC006122.1-201ENST00000493323 440 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN5O00501 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN5O00501 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 SNORD3B-2-202ENST00000571722 791 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.49■□□□□ 0.07
CLDN5O00501 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 AC215219.1-201ENST00000400706 1817 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 AC009093.10-201ENST00000641956 1442 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CLDN5O00501 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.48■□□□□ 0.07
CLDN5O00501 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN5O00501 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN5O00501 AC022217.1-201ENST00000521069 738 ntBASIC15.48■□□□□ 0.07
CLDN5O00501 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.48■□□□□ 0.07
CLDN5O00501 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.48■□□□□ 0.07
CLDN5O00501 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN5O00501 AL139099.5-201ENST00000635274 300 ntBASIC15.48■□□□□ 0.07
CLDN5O00501 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN5O00501 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN5O00501 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN5O00501 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CLDN5O00501 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN5O00501 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN5O00501 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN5O00501 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN5O00501 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN5O00501 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 CALR4P-201ENST00000431943 946 ntBASIC15.47■□□□□ 0.07
CLDN5O00501 AC005077.2-201ENST00000449786 690 ntBASIC15.47■□□□□ 0.07
CLDN5O00501 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDN5O00501 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN5O00501 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms