Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 AC015909.5-201ENST00000624336 2266 ntBASIC12.65□□□□□ -0.38
TMEM235A6NFC5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TMEM235A6NFC5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.65□□□□□ -0.39
TMEM235A6NFC5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.65□□□□□ -0.39
TMEM235A6NFC5 AC215219.1-201ENST00000400706 1817 ntBASIC12.65□□□□□ -0.39
TMEM235A6NFC5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
TMEM235A6NFC5 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AL139385.1-201ENST00000611744 3272 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AC090643.2-201ENST00000623442 2029 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AC069262.1-201ENST00000539058 672 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AC092364.2-202ENST00000597012 1073 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AL136172.1-201ENST00000598590 1394 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CLK3P2-201ENST00000427566 1453 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM235A6NFC5 AL365181.3-201ENST00000605886 3222 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 SALL4P5-201ENST00000419001 1760 ntBASIC12.64□□□□□ -0.39
TMEM235A6NFC5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 Z82170.1-201ENST00000625081 3192 ntBASIC12.63□□□□□ -0.39
TMEM235A6NFC5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM235A6NFC5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms