Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 SNX18-202ENST00000343017 3140 ntBASIC13.99□□□□□ -0.17
LRIT2A6NDA9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AL583810.1-201ENST00000553344 1045 ntBASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AC009955.4-201ENST00000597192 544 ntBASIC13.99□□□□□ -0.17
LRIT2A6NDA9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AC009542.2-202ENST00000619004 1067 ntBASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 AC015818.8-201ENST00000587907 1519 ntBASIC13.99□□□□□ -0.17
LRIT2A6NDA9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRIT2A6NDA9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.98□□□□□ -0.17
LRIT2A6NDA9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 AC011498.7-201ENST00000624986 2027 ntBASIC13.98□□□□□ -0.17
LRIT2A6NDA9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 AC027601.5-201ENST00000624065 2482 ntBASIC13.98□□□□□ -0.17
LRIT2A6NDA9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRIT2A6NDA9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms