Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.9□□□□□ -0.18
SH3PXD2BA1X283 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SH3PXD2BA1X283 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SH3PXD2BA1X283 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AL354702.1-201ENST00000442006 1960 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 GAPDHP40-201ENST00000505218 1006 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MIR4745-201ENST00000577608 62 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 LINC02084-201ENST00000606069 1096 ntBASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SH3PXD2BA1X283 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC092580.3-201ENST00000430932 139 ntBASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC241585.1-201ENST00000433527 519 ntBASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC022447.6-201ENST00000515522 438 ntBASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC044860.1-202ENST00000559481 777 ntBASIC13.88□□□□□ -0.19
SH3PXD2BA1X283 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms