Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CICP14-201ENST00000629111 2732 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AC239868.1-201ENST00000369385 493 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PDIA3P2-201ENST00000428073 158 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AC103988.2-201ENST00000561804 725 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 MIR4722-201ENST00000578292 60 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 AL133499.1-201ENST00000596207 608 ntBASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1G3Q9Y6M4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 FXNP2-201ENST00000411625 547 ntBASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AC242376.1-201ENST00000559033 726 ntBASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 MIR4706-201ENST00000582134 82 ntBASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms