Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AC007967.2-201ENST00000432613 625 ntBASIC13.21□□□□□ -0.29
SSR3Q9UNL2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 KRT8P48-201ENST00000515599 1220 ntBASIC13.21□□□□□ -0.29
SSR3Q9UNL2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AC034105.1-201ENST00000563488 319 ntBASIC13.21□□□□□ -0.29
SSR3Q9UNL2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR3Q9UNL2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR3Q9UNL2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TOMM22P5-201ENST00000416399 439 ntBASIC13.2□□□□□ -0.3
SSR3Q9UNL2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 AC018529.1-201ENST00000613063 361 ntBASIC13.2□□□□□ -0.3
SSR3Q9UNL2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 KRT8P14-201ENST00000414254 1442 ntBASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PCDHB18P-202ENST00000526308 3197 ntBASIC13.2□□□□□ -0.3
SSR3Q9UNL2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms