Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ELL3Q9HB65 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ELL3Q9HB65 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ELL3Q9HB65 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 CLK3P2-201ENST00000427566 1453 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 MAPK10-262ENST00000641051 5738 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC018665.1-201ENST00000622927 1362 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SPTLC1P1-201ENST00000447199 261 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC036164.1-201ENST00000570544 333 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 AL137783.1-201ENST00000623494 1896 ntBASIC12.97□□□□□ -0.33
ELL3Q9HB65 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ELL3Q9HB65 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.97□□□□□ -0.33
ELL3Q9HB65 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.96□□□□□ -0.33
ELL3Q9HB65 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms