Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC004945.1-201ENST00000416738 983 ntBASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 BCYRN1-201ENST00000418539 200 ntBASIC13.93□□□□□ -0.18
TREX2Q9BQ50 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 EIF3FP3-201ENST00000434851 1086 ntBASIC13.93□□□□□ -0.18
TREX2Q9BQ50 RPL7P3-201ENST00000441388 714 ntBASIC13.93□□□□□ -0.18
TREX2Q9BQ50 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 RN7SL219P-201ENST00000582872 296 ntBASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TREX2Q9BQ50 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AC041040.2-201ENST00000622926 2899 ntBASIC13.92□□□□□ -0.18
TREX2Q9BQ50 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.92□□□□□ -0.18
TREX2Q9BQ50 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 ENPP7P5-201ENST00000541031 1031 ntBASIC13.92□□□□□ -0.18
TREX2Q9BQ50 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AC133539.2-201ENST00000604757 467 ntBASIC13.92□□□□□ -0.18
TREX2Q9BQ50 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 AP005019.2-201ENST00000615104 511 ntBASIC13.92□□□□□ -0.18
TREX2Q9BQ50 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TREX2Q9BQ50 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.91□□□□□ -0.18
TREX2Q9BQ50 LRRC59-203ENST00000576448 1531 ntBASIC13.91□□□□□ -0.18
TREX2Q9BQ50 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms