Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AL109954.1-202ENST00000564051 2148 ntBASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 RN7SL767P-201ENST00000493013 295 ntBASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AL021707.6-201ENST00000609212 491 ntBASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 AC067931.2-201ENST00000623655 2003 ntBASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.69■□□□□ 0.42
CRAMP1Q96RY5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 RNVU1-8-201ENST00000364272 125 ntBASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 AC006987.1-201ENST00000413610 527 ntBASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 GNG10P1-201ENST00000452289 199 ntBASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRAMP1Q96RY5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 PPT1-215ENST00000641471 2368 ntBASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 LINC00265-2P-201ENST00000413372 782 ntBASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 RN7SL564P-201ENST00000496309 250 ntBASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 DNM1P51-201ENST00000558149 522 ntBASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 CTBP2P8-201ENST00000422584 1330 ntBASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms