Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AC015688.4-201ENST00000580780 1647 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AC018442.1-201ENST00000421439 2061 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AC006480.2-201ENST00000609770 1337 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AL590440.2-201ENST00000641973 1595 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 KRT18P36-201ENST00000411618 1276 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 FTLP1-201ENST00000449155 526 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 RPS2P36-201ENST00000456516 831 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AC006453.1-201ENST00000636037 1257 ntBASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC85AQ96PX6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC85AQ96PX6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC85AQ96PX6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC85AQ96PX6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 SPCS2P2-201ENST00000603270 608 ntBASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AC126177.1-201ENST00000547829 2218 ntBASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 AC139712.1-201ENST00000378256 1875 ntBASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC85AQ96PX6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC85AQ96PX6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms