Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC011498.7-201ENST00000624986 2027 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC073957.3-201ENST00000609998 6758 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC009947.1-201ENST00000444350 727 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AF186996.4-201ENST00000467186 377 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC112191.1-201ENST00000523689 701 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 KRT19P2-202ENST00000557173 1012 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC099522.2-201ENST00000607001 744 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MIR6074-201ENST00000612054 107 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 TNRC18P1-201ENST00000502875 3650 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 AC135782.3-201ENST00000562782 2105 ntBASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMIM11BQ8TCY0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms