Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHKBP1Q8TBC3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 GCOM2-201ENST00000509133 1104 ntBASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AC103988.2-201ENST00000561804 725 ntBASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 AC009884.2-201ENST00000603110 324 ntBASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 BX088702.1-201ENST00000610784 235 ntBASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 WASH3P-207ENST00000560956 1394 ntBASIC15.46■□□□□ 0.07
SHKBP1Q8TBC3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.46■□□□□ 0.06
SHKBP1Q8TBC3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHKBP1Q8TBC3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SHKBP1Q8TBC3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
SHKBP1Q8TBC3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SHKBP1Q8TBC3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC136759.1-202ENST00000530858 2194 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 FXNP2-201ENST00000411625 547 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PDIA3P2-201ENST00000428073 158 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC006335.1-201ENST00000445200 547 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 EEF1DP6-201ENST00000449232 372 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC131206.1-201ENST00000538078 1211 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 MIR4706-201ENST00000582134 82 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC020922.3-201ENST00000595064 547 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AL353770.1-201ENST00000614915 403 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 AC027601.3-201ENST00000622907 509 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 NAP1L6-202ENST00000641404 1222 ntBASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SHKBP1Q8TBC3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms