Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 TUBBP5-203ENST00000508529 1334 ntBASIC15.03■□□□□ -0
KDM1BQ8NB78 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 RNMTL1P1-201ENST00000454103 560 ntBASIC15.03■□□□□ -0
KDM1BQ8NB78 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.03■□□□□ -0
KDM1BQ8NB78 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 AC022217.1-201ENST00000521069 738 ntBASIC15.03■□□□□ -0
KDM1BQ8NB78 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.03■□□□□ -0
KDM1BQ8NB78 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
KDM1BQ8NB78 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KDM1BQ8NB78 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
KDM1BQ8NB78 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.02■□□□□ -0
KDM1BQ8NB78 CICP4-201ENST00000447359 2812 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.02■□□□□ -0
KDM1BQ8NB78 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
KDM1BQ8NB78 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 AP001267.2-201ENST00000532619 2086 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.02■□□□□ -0
KDM1BQ8NB78 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.02■□□□□ -0
KDM1BQ8NB78 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.02■□□□□ -0
KDM1BQ8NB78 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
KDM1BQ8NB78 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
KDM1BQ8NB78 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.02■□□□□ -0
KDM1BQ8NB78 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.02■□□□□ -0
KDM1BQ8NB78 AC011742.3-201ENST00000439053 820 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 AC005077.2-201ENST00000449786 690 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.02■□□□□ -0
KDM1BQ8NB78 HIST2H2BC-201ENST00000498492 580 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.02■□□□□ -0
KDM1BQ8NB78 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.02■□□□□ -0
KDM1BQ8NB78 MIR3619-201ENST00000579667 83 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 AL645939.5-201ENST00000606834 243 ntBASIC15.02■□□□□ -0
KDM1BQ8NB78 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 AC027601.5-201ENST00000624065 2482 ntBASIC15.02□□□□□ -0.01
KDM1BQ8NB78 AC041040.2-201ENST00000622926 2899 ntBASIC15.02□□□□□ -0.01
KDM1BQ8NB78 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 HSPA7-201ENST00000445535 1927 ntBASIC15.02□□□□□ -0.01
KDM1BQ8NB78 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KDM1BQ8NB78 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KDM1BQ8NB78 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KDM1BQ8NB78 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KDM1BQ8NB78 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms