Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AC011840.2-201ENST00000563063 1520 ntBASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AP006294.1-201ENST00000415407 339 ntBASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AP001002.3-201ENST00000623482 206 ntBASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AP000593.2-201ENST00000542775 1433 ntBASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 AC087386.2-201ENST00000623212 4637 ntBASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC103988.2-201ENST00000561804 725 ntBASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LSMEM1Q8N8F7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms