Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 YBX1P6-201ENST00000442962 1002 ntBASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC009955.4-201ENST00000597192 544 ntBASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC009542.2-202ENST00000619004 1067 ntBASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC009093.10-201ENST00000641956 1442 ntBASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN20Q4JDL3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AL365209.1-201ENST00000624418 6473 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AC079178.1-201ENST00000420915 656 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 ATP5G2P4-201ENST00000442175 420 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AL035414.1-201ENST00000451327 857 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 DUX4L46-201ENST00000566845 751 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 EEF1DP1-201ENST00000585891 896 ntBASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN20Q4JDL3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms