Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CNN2P2-201ENST00000443536 909 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CNN2P3-201ENST00000450201 906 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 HLA-J-203ENST00000494367 1087 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AL136317.3-201ENST00000618497 906 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AL033527.5-202ENST00000641632 1098 ntBASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.31□□□□□ -0.44
ANKRD55Q3KP44 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AL080243.2-201ENST00000418783 582 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 PMS2P2-201ENST00000425039 1128 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 FAM58DP-201ENST00000428076 619 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 RBPMS2P1-201ENST00000437762 623 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 FAM86GP-201ENST00000448322 971 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms