Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWISTNBQ3B726 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.82■□□□□ 0.6
TWISTNBQ3B726 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWISTNBQ3B726 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWISTNBQ3B726 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWISTNBQ3B726 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 KRT8P13-201ENST00000463294 1010 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 AC091804.1-201ENST00000486888 567 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 AC013355.1-201ENST00000562625 723 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 SNORD3B-2-202ENST00000571722 791 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 AC244093.1-201ENST00000610837 814 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 MIR6074-201ENST00000612054 107 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 RN7SL832P-201ENST00000607781 1756 ntBASIC18.81■□□□□ 0.6
TWISTNBQ3B726 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TWISTNBQ3B726 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 AC106794.1-201ENST00000506935 792 ntBASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 MIR3615-201ENST00000581999 87 ntBASIC18.8■□□□□ 0.6
TWISTNBQ3B726 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 AC099063.4-201ENST00000641099 1602 ntBASIC18.8■□□□□ 0.6
TWISTNBQ3B726 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TWISTNBQ3B726 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.79■□□□□ 0.6
TWISTNBQ3B726 MIR6787-201ENST00000616675 61 ntBASIC18.79■□□□□ 0.6
TWISTNBQ3B726 AC133540.1-201ENST00000620845 1019 ntBASIC18.79■□□□□ 0.6
TWISTNBQ3B726 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.79■□□□□ 0.6
TWISTNBQ3B726 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms