Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC006122.1-201ENST00000493323 440 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC009779.1-201ENST00000551138 283 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 RN7SL774P-201ENST00000577467 290 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AL606495.2-201ENST00000605867 535 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC091544.8-201ENST00000619490 361 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 AL805961.1-203ENST00000641078 1258 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC007686.3-201ENST00000619017 3487 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC006504.5-208ENST00000588784 2401 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B3Q16720 TMBIM7P-202ENST00000641474 1516 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B3Q16720 AC144522.1-201ENST00000625111 1658 ntBASIC18.03■□□□□ 0.48
ATP2B3Q16720 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 MIR769-201ENST00000390225 118 ntBASIC18.02■□□□□ 0.48
ATP2B3Q16720 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 ACTG1P2-201ENST00000415776 1125 ntBASIC18.02■□□□□ 0.48
ATP2B3Q16720 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 ACTG1P11-201ENST00000425411 1125 ntBASIC18.02■□□□□ 0.48
ATP2B3Q16720 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 AC125604.1-201ENST00000496255 707 ntBASIC18.02■□□□□ 0.48
ATP2B3Q16720 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
ATP2B3Q16720 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B3Q16720 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B3Q16720 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B3Q16720 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ATP2B3Q16720 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B3Q16720 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2B3Q16720 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B3Q16720 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 CYP4F23P-201ENST00000593402 1579 ntBASIC18.01■□□□□ 0.47
ATP2B3Q16720 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 AL008707.1-201ENST00000422498 534 ntBASIC18.01■□□□□ 0.47
ATP2B3Q16720 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 RBM8B-201ENST00000555532 525 ntBASIC18.01■□□□□ 0.47
ATP2B3Q16720 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B3Q16720 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B3Q16720 AC100757.4-201ENST00000626934 759 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms