Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RPS3AP61247 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.95□□□□□ -0.18
RPS3AP61247 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 INE1-201ENST00000456273 945 ntBASIC13.95□□□□□ -0.18
RPS3AP61247 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.95□□□□□ -0.18
RPS3AP61247 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.95□□□□□ -0.18
RPS3AP61247 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 AC120045.2-201ENST00000567334 178 ntBASIC13.95□□□□□ -0.18
RPS3AP61247 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.95□□□□□ -0.18
RPS3AP61247 AC093813.1-201ENST00000605066 256 ntBASIC13.95□□□□□ -0.18
RPS3AP61247 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 CU634019.7-201ENST00000624153 1185 ntBASIC13.95□□□□□ -0.18
RPS3AP61247 FP236241.2-201ENST00000624906 1185 ntBASIC13.95□□□□□ -0.18
RPS3AP61247 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.95□□□□□ -0.18
RPS3AP61247 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.95□□□□□ -0.18
RPS3AP61247 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPS3AP61247 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.94□□□□□ -0.18
RPS3AP61247 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 AC007389.4-201ENST00000454674 793 ntBASIC13.94□□□□□ -0.18
RPS3AP61247 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.94□□□□□ -0.18
RPS3AP61247 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.94□□□□□ -0.18
RPS3AP61247 AL359711.2-201ENST00000563105 872 ntBASIC13.94□□□□□ -0.18
RPS3AP61247 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
RPS3AP61247 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
RPS3AP61247 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RPS3AP61247 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPS3AP61247 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.94□□□□□ -0.18
RPS3AP61247 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms