Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 AC105129.2-201ENST00000559536 390 ntBASIC13.78□□□□□ -0.2
PER3P56645 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.78□□□□□ -0.2
PER3P56645 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PER3P56645 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PER3P56645 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PER3P56645 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PER3P56645 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 AL138799.1-201ENST00000448213 1675 ntBASIC13.77□□□□□ -0.21
PER3P56645 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 AC245884.6-201ENST00000515672 1067 ntBASIC13.77□□□□□ -0.21
PER3P56645 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 MIR3619-201ENST00000579667 83 ntBASIC13.77□□□□□ -0.21
PER3P56645 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.77□□□□□ -0.21
PER3P56645 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.77□□□□□ -0.21
PER3P56645 AC138649.2-201ENST00000615886 705 ntBASIC13.77□□□□□ -0.21
PER3P56645 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.77□□□□□ -0.21
PER3P56645 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.77□□□□□ -0.21
PER3P56645 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PER3P56645 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.76□□□□□ -0.21
PER3P56645 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.76□□□□□ -0.21
PER3P56645 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 KRT8P19-201ENST00000551916 1455 ntBASIC13.76□□□□□ -0.21
PER3P56645 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms