Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NKX2-5P52952 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.52□□□□□ -0.41
NKX2-5P52952 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.52□□□□□ -0.41
NKX2-5P52952 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX2-5P52952 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NKX2-5P52952 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC004987.2-201ENST00000395959 1148 ntBASIC12.51□□□□□ -0.41
NKX2-5P52952 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NKX2-5P52952 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SNORA78-201ENST00000459373 127 ntBASIC12.51□□□□□ -0.41
NKX2-5P52952 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.51□□□□□ -0.41
NKX2-5P52952 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NKX2-5P52952 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.51□□□□□ -0.41
NKX2-5P52952 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NKX2-5P52952 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC129492.6-201ENST00000611383 1305 ntBASIC12.51□□□□□ -0.41
NKX2-5P52952 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NKX2-5P52952 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.51□□□□□ -0.41
NKX2-5P52952 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-5P52952 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 AC009533.1-201ENST00000539757 3158 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms