Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 AC139749.1-202ENST00000617529 3139 ntBASIC13.17□□□□□ -0.3
CSNK1A1P48729 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 ARSEP1-201ENST00000420443 635 ntBASIC13.17□□□□□ -0.3
CSNK1A1P48729 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 BX640514.1-201ENST00000583223 1918 ntBASIC13.17□□□□□ -0.3
CSNK1A1P48729 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AP001267.2-201ENST00000532619 2086 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AC015802.1-201ENST00000588104 1449 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 PEG13-201ENST00000631594 5667 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 CROCCP4-201ENST00000457096 498 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 KRT17P8-201ENST00000540749 863 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 AC106886.1-201ENST00000568660 600 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 RHOXF1P1-202ENST00000635473 501 ntBASIC13.16□□□□□ -0.3
CSNK1A1P48729 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1A1P48729 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1A1P48729 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms