Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
PCP4P48539 ADCY5-210ENST00000491190 3962 ntTSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC9.61□□□□□ -0.87
PCP4P48539 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
PCP4P48539 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 CAP2-201ENST00000229922 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PCP4P48539 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 NT5C1B-201ENST00000304081 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 AC011199.1-201ENST00000625022 3362 ntBASIC9.6□□□□□ -0.87
PCP4P48539 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 PSG4-202ENST00000405312 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 DHRS4-AS1-205ENST00000556379 2852 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 AC034229.3-201ENST00000606203 2436 ntBASIC9.6□□□□□ -0.87
PCP4P48539 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
PCP4P48539 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 TSPY23P-201ENST00000440136 739 ntBASIC9.6□□□□□ -0.87
PCP4P48539 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC9.6□□□□□ -0.87
PCP4P48539 TK1-204ENST00000590430 683 ntTSL 3 BASIC9.6□□□□□ -0.87
PCP4P48539 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC9.6□□□□□ -0.87
PCP4P48539 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 GAK-223ENST00000628912 497 ntTSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
PCP4P48539 ILF3-AS1-201ENST00000591501 1983 ntBASIC9.6□□□□□ -0.87
PCP4P48539 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 AC004156.1-201ENST00000591866 3319 ntTSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 ITGAM-201ENST00000287497 3595 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 LINC01568-207ENST00000641790 1380 ntBASIC9.6□□□□□ -0.87
PCP4P48539 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 EBF3-202ENST00000368648 4375 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PCP4P48539 RAP1GAP2-204ENST00000542807 3110 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
PCP4P48539 ITGAD-201ENST00000389202 3912 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 ZBTB24-201ENST00000230122 5519 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PCP4P48539 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 AC138969.3-201ENST00000546612 1459 ntBASIC9.59□□□□□ -0.87
PCP4P48539 AC138932.2-201ENST00000548268 1459 ntBASIC9.59□□□□□ -0.87
PCP4P48539 AC126755.4-201ENST00000549796 1459 ntBASIC9.59□□□□□ -0.87
PCP4P48539 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 PLUT-201ENST00000499662 2518 ntTSL 3 BASIC9.59□□□□□ -0.87
PCP4P48539 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PCP4P48539 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 FLRT1-201ENST00000246841 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 AC025279.1-201ENST00000604430 4818 ntTSL 5 BASIC9.59□□□□□ -0.87
PCP4P48539 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 AC019294.1-202ENST00000566174 2071 ntBASIC9.59□□□□□ -0.87
PCP4P48539 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 CXXC4-AS1-201ENST00000500179 2968 ntTSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
PCP4P48539 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PCP4P48539 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms