RNA–Protein interactions for RNA: ENST00000378595.7

AFF4-203, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best) BASIC

Gene AFF4, Length 3,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-203ENST00000378595 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
AFF4-203ENST00000378595 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
AFF4-203ENST00000378595 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
AFF4-203ENST00000378595 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
AFF4-203ENST00000378595 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
AFF4-203ENST00000378595 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
AFF4-203ENST00000378595 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
AFF4-203ENST00000378595 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
AFF4-203ENST00000378595 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
AFF4-203ENST00000378595 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
AFF4-203ENST00000378595 HRCP23327 699 aa19.5■□□□□ 0.71
AFF4-203ENST00000378595 LOC105371045A0A1W2PR82 267 aa19.47■□□□□ 0.71
AFF4-203ENST00000378595 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
AFF4-203ENST00000378595 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
AFF4-203ENST00000378595 ABCC9O60706 1549 aa19.34■□□□□ 0.69
AFF4-203ENST00000378595 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
AFF4-203ENST00000378595 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
AFF4-203ENST00000378595 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
AFF4-203ENST00000378595 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
AFF4-203ENST00000378595 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
AFF4-203ENST00000378595 NACADO15069 1562 aa18.62■□□□□ 0.57
AFF4-203ENST00000378595 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
AFF4-203ENST00000378595 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
AFF4-203ENST00000378595 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
AFF4-203ENST00000378595 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
AFF4-203ENST00000378595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
AFF4-203ENST00000378595 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
AFF4-203ENST00000378595 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
AFF4-203ENST00000378595 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
AFF4-203ENST00000378595 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
AFF4-203ENST00000378595 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
AFF4-203ENST00000378595 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
AFF4-203ENST00000378595 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
AFF4-203ENST00000378595 WIZO95785 1651 aa18.16■□□□□ 0.5
AFF4-203ENST00000378595 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
AFF4-203ENST00000378595 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
AFF4-203ENST00000378595 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
AFF4-203ENST00000378595 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
AFF4-203ENST00000378595 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
AFF4-203ENST00000378595 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
AFF4-203ENST00000378595 APLP2Q06481 763 aa17.97■□□□□ 0.47
AFF4-203ENST00000378595 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
AFF4-203ENST00000378595 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
AFF4-203ENST00000378595 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
AFF4-203ENST00000378595 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
AFF4-203ENST00000378595 ITGAEP38570 1179 aa17.83■□□□□ 0.45
AFF4-203ENST00000378595 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
AFF4-203ENST00000378595 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
AFF4-203ENST00000378595 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
AFF4-203ENST00000378595 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
AFF4-203ENST00000378595 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
AFF4-203ENST00000378595 ATP1B4Q9UN42 357 aaPredicted RBP17.74■□□□□ 0.43
AFF4-203ENST00000378595 SOGA1O94964 1423 aa17.7■□□□□ 0.42
AFF4-203ENST00000378595 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
AFF4-203ENST00000378595 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
AFF4-203ENST00000378595 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
AFF4-203ENST00000378595 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
AFF4-203ENST00000378595 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
AFF4-203ENST00000378595 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
AFF4-203ENST00000378595 MIER1Q8N108 512 aa17.56■□□□□ 0.4
AFF4-203ENST00000378595 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
AFF4-203ENST00000378595 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
AFF4-203ENST00000378595 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
AFF4-203ENST00000378595 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
AFF4-203ENST00000378595 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
AFF4-203ENST00000378595 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
AFF4-203ENST00000378595 CLIP1P30622 1438 aa17.31■□□□□ 0.36
AFF4-203ENST00000378595 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
AFF4-203ENST00000378595 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
AFF4-203ENST00000378595 BCANQ96GW7 911 aa17.28■□□□□ 0.36
AFF4-203ENST00000378595 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
AFF4-203ENST00000378595 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
AFF4-203ENST00000378595 EEA1Q15075 1411 aa17.26■□□□□ 0.35
AFF4-203ENST00000378595 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
AFF4-203ENST00000378595 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
AFF4-203ENST00000378595 CNGB1Q14028 1251 aaPredicted RBP17.21■□□□□ 0.35
AFF4-203ENST00000378595 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
AFF4-203ENST00000378595 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
AFF4-203ENST00000378595 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
AFF4-203ENST00000378595 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
AFF4-203ENST00000378595 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
AFF4-203ENST00000378595 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
AFF4-203ENST00000378595 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
AFF4-203ENST00000378595 MYT1Q01538 1121 aa17.07■□□□□ 0.32
AFF4-203ENST00000378595 CFTRP13569 1480 aa17.06■□□□□ 0.32
AFF4-203ENST00000378595 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
AFF4-203ENST00000378595 KCNH8Q96L42 1107 aa17.05■□□□□ 0.32
AFF4-203ENST00000378595 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
AFF4-203ENST00000378595 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
AFF4-203ENST00000378595 NESP48681 1621 aa17.04■□□□□ 0.32
AFF4-203ENST00000378595 CUX1P39880 1505 aa17.02■□□□□ 0.32
AFF4-203ENST00000378595 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.31
AFF4-203ENST00000378595 KIF21BO75037 1637 aa17.01■□□□□ 0.31
AFF4-203ENST00000378595 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
AFF4-203ENST00000378595 TOP2BQ02880 1626 aa16.98■□□□□ 0.31
AFF4-203ENST00000378595 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
AFF4-203ENST00000378595 CUX2O14529 1486 aa16.9■□□□□ 0.3
AFF4-203ENST00000378595 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
AFF4-203ENST00000378595 FKBP8Q14318 412 aa16.9■□□□□ 0.3
AFF4-203ENST00000378595 KIF27Q86VH2 1401 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms