Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
LTBRP36941 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
LTBRP36941 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBRP36941 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 AC138761.6-201ENST00000583997 1423 ntBASIC14.85□□□□□ -0.03
LTBRP36941 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.85□□□□□ -0.03
LTBRP36941 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.85□□□□□ -0.03
LTBRP36941 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.85□□□□□ -0.03
LTBRP36941 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
LTBRP36941 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 PCDHA1-201ENST00000378133 2726 ntBASIC14.85□□□□□ -0.03
LTBRP36941 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.85□□□□□ -0.03
LTBRP36941 RPS18P9-201ENST00000482817 460 ntBASIC14.85□□□□□ -0.03
LTBRP36941 RN7SKP155-201ENST00000516031 288 ntBASIC14.85□□□□□ -0.03
LTBRP36941 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.85□□□□□ -0.03
LTBRP36941 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.85□□□□□ -0.03
LTBRP36941 FBXO36P1-201ENST00000579006 471 ntBASIC14.85□□□□□ -0.03
LTBRP36941 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.85□□□□□ -0.03
LTBRP36941 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.85□□□□□ -0.03
LTBRP36941 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 AC005274.1-201ENST00000623460 802 ntBASIC14.85□□□□□ -0.03
LTBRP36941 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.85□□□□□ -0.03
LTBRP36941 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.85□□□□□ -0.03
LTBRP36941 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LTBRP36941 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LTBRP36941 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.84□□□□□ -0.03
LTBRP36941 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 AP000244.1-201ENST00000424582 201 ntBASIC14.84□□□□□ -0.03
LTBRP36941 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.84□□□□□ -0.03
LTBRP36941 AC092573.1-201ENST00000433054 884 ntBASIC14.84□□□□□ -0.03
LTBRP36941 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.84□□□□□ -0.03
LTBRP36941 AC027612.2-202ENST00000445955 1199 ntBASIC14.84□□□□□ -0.03
LTBRP36941 AC092903.1-201ENST00000466506 262 ntBASIC14.84□□□□□ -0.03
LTBRP36941 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.84□□□□□ -0.03
LTBRP36941 AC100858.1-201ENST00000514059 1228 ntBASIC14.84□□□□□ -0.03
LTBRP36941 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.84□□□□□ -0.03
LTBRP36941 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 AL136982.5-201ENST00000605222 294 ntBASIC14.84□□□□□ -0.03
LTBRP36941 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms