Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT20P35900 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KRT20P35900 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KRT20P35900 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT20P35900 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KRT20P35900 AC093525.8-201ENST00000624099 1342 ntBASIC14.13□□□□□ -0.15
KRT20P35900 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT20P35900 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.12□□□□□ -0.15
KRT20P35900 PTP4A1P2-201ENST00000546033 454 ntBASIC14.12□□□□□ -0.15
KRT20P35900 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.12□□□□□ -0.15
KRT20P35900 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.12□□□□□ -0.15
KRT20P35900 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 AP005019.2-201ENST00000615104 511 ntBASIC14.12□□□□□ -0.15
KRT20P35900 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.12□□□□□ -0.15
KRT20P35900 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.12□□□□□ -0.15
KRT20P35900 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 AL731571.1-201ENST00000617058 5428 ntBASIC14.12□□□□□ -0.15
KRT20P35900 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KRT20P35900 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
KRT20P35900 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT20P35900 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 CICP17-201ENST00000418553 2377 ntBASIC14.11□□□□□ -0.15
KRT20P35900 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 LRRC59-203ENST00000576448 1531 ntBASIC14.11□□□□□ -0.15
KRT20P35900 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.11□□□□□ -0.15
KRT20P35900 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.11□□□□□ -0.15
KRT20P35900 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.11□□□□□ -0.15
KRT20P35900 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRT20P35900 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.11□□□□□ -0.15
KRT20P35900 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms