Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 AC018529.2-202ENST00000611482 3087 ntBASIC13.37□□□□□ -0.27
GDF1P27539 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.37□□□□□ -0.27
GDF1P27539 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GDF1P27539 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.37□□□□□ -0.27
GDF1P27539 CALR4P-201ENST00000431943 946 ntBASIC13.37□□□□□ -0.27
GDF1P27539 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.37□□□□□ -0.27
GDF1P27539 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.37□□□□□ -0.27
GDF1P27539 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.37□□□□□ -0.27
GDF1P27539 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.37□□□□□ -0.27
GDF1P27539 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 AC005962.1-201ENST00000584100 773 ntBASIC13.37□□□□□ -0.27
GDF1P27539 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GDF1P27539 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDF1P27539 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.37□□□□□ -0.27
GDF1P27539 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDF1P27539 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.36□□□□□ -0.27
GDF1P27539 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
GDF1P27539 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.36□□□□□ -0.27
GDF1P27539 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GDF1P27539 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 RPL18P13-201ENST00000478088 569 ntBASIC13.36□□□□□ -0.27
GDF1P27539 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.36□□□□□ -0.27
GDF1P27539 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.36□□□□□ -0.27
GDF1P27539 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.36□□□□□ -0.27
GDF1P27539 NDUFV2P1-201ENST00000596415 907 ntBASIC13.36□□□□□ -0.27
GDF1P27539 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
GDF1P27539 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.36□□□□□ -0.27
GDF1P27539 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 AL139099.5-201ENST00000635274 300 ntBASIC13.36□□□□□ -0.27
GDF1P27539 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms