Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.71■□□□□ 0.43
NCLP19338 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCLP19338 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC17.71■□□□□ 0.43
NCLP19338 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NCLP19338 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NCLP19338 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.71■□□□□ 0.42
NCLP19338 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 KRT18P43-201ENST00000469825 1281 ntBASIC17.7■□□□□ 0.42
NCLP19338 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 SERBP1P5-201ENST00000510079 1181 ntBASIC17.7■□□□□ 0.42
NCLP19338 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.7■□□□□ 0.42
NCLP19338 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NCLP19338 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.7■□□□□ 0.42
NCLP19338 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 AL844908.2-201ENST00000609461 460 ntBASIC17.7■□□□□ 0.42
NCLP19338 AC009118.2-201ENST00000613275 655 ntBASIC17.7■□□□□ 0.42
NCLP19338 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NCLP19338 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCLP19338 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.7■□□□□ 0.42
NCLP19338 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.69■□□□□ 0.42
NCLP19338 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NCLP19338 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.69■□□□□ 0.42
NCLP19338 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.69■□□□□ 0.42
NCLP19338 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.69■□□□□ 0.42
NCLP19338 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NCLP19338 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.69■□□□□ 0.42
NCLP19338 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.69■□□□□ 0.42
NCLP19338 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 AL139385.1-201ENST00000611744 3272 ntBASIC17.69■□□□□ 0.42
NCLP19338 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NCLP19338 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.69■□□□□ 0.42
NCLP19338 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NCLP19338 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.69■□□□□ 0.42
NCLP19338 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms