Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SFTPBP07988 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.94□□□□□ -0.34
SFTPBP07988 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 AC136759.1-202ENST00000530858 2194 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 AP006294.1-201ENST00000415407 339 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.93□□□□□ -0.34
SFTPBP07988 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.93□□□□□ -0.34
SFTPBP07988 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.93□□□□□ -0.34
SFTPBP07988 AC093726.1-201ENST00000608064 963 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 AC099568.2-201ENST00000609194 695 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 MIR8072-201ENST00000614241 80 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 DRD5P1-201ENST00000456605 1438 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 AP001267.2-201ENST00000532619 2086 ntBASIC12.93□□□□□ -0.34
SFTPBP07988 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.93□□□□□ -0.34
SFTPBP07988 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SFTPBP07988 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SFTPBP07988 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
SFTPBP07988 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 AC093525.8-201ENST00000624099 1342 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 KRT17P7-201ENST00000451704 1104 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 RN7SL752P-201ENST00000463779 287 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 FAM86LP-201ENST00000478302 853 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 ELK1P1-201ENST00000485699 580 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.92□□□□□ -0.34
SFTPBP07988 STRCP1-201ENST00000509801 5328 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.92□□□□□ -0.34
SFTPBP07988 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.92□□□□□ -0.34
SFTPBP07988 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.92□□□□□ -0.34
SFTPBP07988 RARRES2P5-201ENST00000564013 466 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 AC036164.1-201ENST00000570544 333 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 CTBP2P3-201ENST00000585629 1255 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.92□□□□□ -0.34
SFTPBP07988 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms