Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APOEP02649 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.51■□□□□ 0.07
APOEP02649 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 AC018442.1-201ENST00000421439 2061 ntBASIC15.5■□□□□ 0.07
APOEP02649 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 RN7SKP230-201ENST00000365642 335 ntBASIC15.5■□□□□ 0.07
APOEP02649 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.5■□□□□ 0.07
APOEP02649 MIR4741-201ENST00000579822 90 ntBASIC15.5■□□□□ 0.07
APOEP02649 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.5■□□□□ 0.07
APOEP02649 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
APOEP02649 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
APOEP02649 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 BX640514.1-201ENST00000583223 1918 ntBASIC15.49■□□□□ 0.07
APOEP02649 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 AC020910.5-201ENST00000623668 1865 ntBASIC15.49■□□□□ 0.07
APOEP02649 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.49■□□□□ 0.07
APOEP02649 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.49■□□□□ 0.07
APOEP02649 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.49■□□□□ 0.07
APOEP02649 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.49■□□□□ 0.07
APOEP02649 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.49■□□□□ 0.07
APOEP02649 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 AL583810.1-201ENST00000553344 1045 ntBASIC15.49■□□□□ 0.07
APOEP02649 RN7SL560P-201ENST00000577943 264 ntBASIC15.49■□□□□ 0.07
APOEP02649 EEF1DP1-201ENST00000585891 896 ntBASIC15.49■□□□□ 0.07
APOEP02649 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.49■□□□□ 0.07
APOEP02649 AC002472.3-201ENST00000640124 621 ntBASIC15.49■□□□□ 0.07
APOEP02649 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
APOEP02649 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
APOEP02649 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.49■□□□□ 0.07
APOEP02649 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APOEP02649 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOEP02649 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOEP02649 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
APOEP02649 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOEP02649 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.48■□□□□ 0.07
APOEP02649 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
APOEP02649 INE2-201ENST00000630399 1874 ntBASIC15.48■□□□□ 0.07
APOEP02649 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.48■□□□□ 0.07
APOEP02649 TUBB1P2-201ENST00000422712 1306 ntBASIC15.48■□□□□ 0.07
APOEP02649 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.48■□□□□ 0.07
APOEP02649 TUBB1P1-201ENST00000503144 1300 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms