Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX3O95343 TP53TG3HP-202ENST00000569755 579 ntBASIC14.45□□□□□ -0.1
SIX3O95343 MIR4745-201ENST00000577608 62 ntBASIC14.45□□□□□ -0.1
SIX3O95343 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX3O95343 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SIX3O95343 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SIX3O95343 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX3O95343 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX3O95343 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX3O95343 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.45□□□□□ -0.1
SIX3O95343 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX3O95343 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SIX3O95343 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX3O95343 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX3O95343 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX3O95343 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.45□□□□□ -0.1
SIX3O95343 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX3O95343 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX3O95343 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SIX3O95343 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 BAATP1-201ENST00000412284 1225 ntBASIC14.44□□□□□ -0.1
SIX3O95343 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX3O95343 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.44□□□□□ -0.1
SIX3O95343 AC138466.3-201ENST00000619983 221 ntBASIC14.44□□□□□ -0.1
SIX3O95343 ENPP7P14-201ENST00000621765 1040 ntBASIC14.44□□□□□ -0.1
SIX3O95343 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SIX3O95343 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 AL138709.1-201ENST00000614840 1693 ntBASIC14.44□□□□□ -0.1
SIX3O95343 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 HSPA8P5-201ENST00000456928 2069 ntBASIC14.44□□□□□ -0.1
SIX3O95343 AC009093.2-202ENST00000620513 2079 ntBASIC14.44□□□□□ -0.1
SIX3O95343 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX3O95343 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SIX3O95343 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX3O95343 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX3O95343 AL359881.3-201ENST00000602640 1721 ntBASIC14.44□□□□□ -0.1
SIX3O95343 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 FKBP4P6-201ENST00000457486 1332 ntBASIC14.43□□□□□ -0.1
SIX3O95343 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
SIX3O95343 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.43□□□□□ -0.1
SIX3O95343 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIX3O95343 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIX3O95343 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms